For small molecular systems, the electro-static potential (ESP) fitting
method [70,71,72] is useful to determine an effective
charge of each atom, while the ESP fitting method cannot be applied
for large molecules and bulk systems, since there are not enough
sampling points for atoms far from surface areas in the ESP fitting method.
In the ESP fitting method an effective point net charge on each atom
is determined by a least square method with constraints so that
the sum of the electro-static potential by effective point charges
can reproduce electro-static potential calculated by the DFT calculation
as much as possible.
The ESP fitting charge is calculated by the following
two steps:

**(1) SCF calculation**

After finishing a usual SCF calculation, you have two output files:

System.Name.out System.Name.vhart.cubeThere is no additional keyword to generate the two files which are default output files by the SCF calculation, while the keyword 'level.of.fileout' should be 1 or 2.

Let us compile a program code for calculating the ESP fitting charge. Move the directory 'source' and then compile as follows:

% make espWhen the compilation is completed normally, then you can find an executable file 'esp' in the directory 'work'. The ESP fitting charge can be calculated from two files '

% ./esp met -c 0 -s 1.4 2.0Then, it is enough to specify the file name without the file extension, however, two files 'met.out' and 'met.vhart.cube' must exist in the directory 'work'. The options '-c' and '-s' are key parameters to specify a constraint and scale factors. You can find the following statement in the header part of a source code 'esp.c':

-c constraint parameter '-c 0' means charge conservation '-c 1' means charge and dipole moment conservation -s scale factors for vdw radius '-s 1.4 2.0' means that 1.4 and 2.0 are 1st and 2nd scale factorsIn the ESP fitting method, we support two constraints, charge conservation and, charge and dipole moment conservation. Although the latter can reproduce charge and dipole moment calculated by the DFT calculation, it seems that the introduction of the dipole moment conservation gives often physically unacceptable point charges especially for a relatively large molecule. Thus, we would like to recommend the former constraint. The sampling points are given by the grids in real space between two shells of the first and second scale factors times van der Waals radii [73]. In the above example, 1.4 and 2.0 correspond to the first and second scale factors. The calculated result appears in the standard output (your display) as follows:

% ./esp met -c 0 -s 1.4 2.0 ****************************************************************** ****************************************************************** esp: effective charges by a ESP fitting method Copyright (C), 2004, Taisuke Ozaki This is free software, and you are welcome to redistribute it under the constitution of the GNU-GPL. ****************************************************************** ****************************************************************** Constraint: charge Scale factors for vdw radius 1.40000 2.00000 Number of grids in a van der Waals shell = 28464 Volume per grid = 0.0235870615 (Bohr^3) Success Atom= 1 Fitting Effective Charge= -0.93558216739 Atom= 2 Fitting Effective Charge= 0.23389552572 Atom= 3 Fitting Effective Charge= 0.23389569182 Atom= 4 Fitting Effective Charge= 0.23389535126 Atom= 5 Fitting Effective Charge= 0.23389559858 Magnitude of dipole moment 0.0000015089 (Debye) Component x y z 0.0000003114 -0.0000002455 -0.0000014558 RMS between the given ESP and fitting charges (Hartree/Bohr^3)= 0.096515449505

2016-04-03