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OpenMx-3.9 : segmentation fault at runtime with gcc-9 Date: 2021/08/16 17:09 Name: Deepali Rai   <DEEPALI.RAI@AMD.COM> Hi All, I see a runtime crash for runtestL3 input set with gcc-9.3, below is the stack trace attached. This I get on runnning - > mpirun -np 16 ./openmx -runtestL3 >>>>>>>>>>>>>>>>>>>>>>> ==== backtrace (tid: 21928) ==== 0 0x0000000000056e59 ucs_debug_print_backtrace() ???:0 1 0x0000000000012b20 .annobin_sigaction.c() sigaction.c:0 2 0x000000000061eee0 Embedding_Matrix() Krylov.c:0 3 0x0000000000639ca0 Krylov_Col._omp_fn.4() Krylov.c:0 4 0x00000000000116d6 GOMP_parallel() ???:0 5 0x0000000000627acd Krylov_Col() Krylov.c:0 6 0x000000000045ec5b DFT() ???:0 7 0x00000000006c30df run_main() Runtest.c:0 8 0x00000000006c37f2 Runtest() ???:0 9 0x000000000040502d main() ???:0 10 0x00000000000237b3 __libc_start_main() ???:0 11 0x0000000000405d8e _start() ???:0 ================================= [XXX006:21928] *** Process received signal *** [XXXXX006:21928] Signal: Segmentation fault (11) [XXXXX006:21928] Signal code: (-6) [XXXXX006:21928] Failing at address: 0x44f000055a8 Do anyone know here what is the issue ? PS: option used for compilation with gcc-9.3 AOCLROOT =/home/aocl/gcc/3.0-6 (GCC compiled AOCL library) CC = mpicc -Dkcomp -O3 -march=znver2 -fopenmp -I/$(AOCLROOT)/include FC = mpif90 -Wno-argument-mismatch -O3 -march=znver2 -fopenmp -I/$(AOCLROOT)/include LIB = -L/usr/lib/gcc/x86_64-linux-gnu/9 -lgfortran -lpthread -L/$(AOCLROOT)/lib -lfftw3 -L/$(AOCLROOT)/lib -lscalapack -lflame -lblis -L/usr/lib/x86_64-linux-gnu/9 -lmpi -lmpi_mpifh -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lm

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Re: OpenMx-3.9 : segmentation fault at runtime with gcc-9 ( No.1 ) Date: 2021/08/17 02:30 Name: Naoya Yamaguchi Hi, Can you try removing `-Dkcomp` from `CC`? This issue may come from wrong data alignment in codes using SSE. Regards, Naoya Yamaguchi Re: OpenMx-3.9 : segmentation fault at runtime with gcc-9 ( No.2 ) Date: 2021/08/17 07:59 Name: T. Ozaki Hi, Did you successfully finish runtest, runtestL, and runtestL2? I wonder that memory shortage may happen for the case using 16 MPI processes, since runtestL3 will require considerable memory. Regards, TO Re: OpenMx-3.9 : segmentation fault at runtime with gcc-9 ( No.3 ) Date: 2021/08/18 20:20 Name: Deepali Rai Thanks for the quick response! Adding -Dnosse -Dnoomp to Krylov.c compilation resolves the crash with gcc. Regards, Deepali

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