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OpenMx installation on Asus G2P laptop Date: 2008/06/21 23:46 Name: Naoto   <naotodate74@gmai.com> Hello All! I am trying to install OpenMx 3.3 on my Asus G2P laptop with an Intel core 2 duo T7200 dual core processor and linux kubuntu 7.10 64bit I don't know how to modify the CC and LIB lines in the makefile. Could someone help me? Thanks a lot in advance Naoto I wrote this: mpicc = /usr/lib64/mpich/bin/mpiCC CC = $(mpicc) -O3 -I/usr/lib64/include -I/usr/include -I/home/naoto/include LIB = -L/home/naoto/lib -L/usr/lib64 -llapack -lfftw3 -lblas -lg2c but I got the following output: In file included from openmx.c:68: openmx_common.h:105:17: error: mpi.h: No such file or directory openmx_common.h:106: error: ‘MPI_Comm’ does not name a type openmx_common.h:2439: error: ‘MPI_Comm’ has not been declared openmx_common.h:2445: error: ‘MPI_Comm’ has not been declared openmx_common.h:2486: error: variable or field ‘Eigen_PReHH’ declared void openmx_common.h:2486: error: ‘MPI_Comm’ was not declared in this scope openmx_common.h:2487: error: expected primary-expression before ‘double’ openmx_common.h:2487: error: expected primary-expression before ‘double’ openmx_common.h:2487: error: expected primary-expression before ‘int’ openmx_common.h:2487: error: expected primary-expression before ‘int’ openmx_common.h:2487: error: expected primary-expression before ‘int’ openmx_common.h:2487: error: initializer expression list treated as compound expression openmx_common.h:2488: error: variable or field ‘Eigen_PHH’ declared void openmx_common.h:2488: error: ‘MPI_Comm’ was not declared in this scope openmx_common.h:2489: error: expected primary-expression before ‘*’ token openmx_common.h:2489: error: ‘ac’ was not declared in this scope openmx_common.h:2489: error: expected primary-expression before ‘double’ openmx_common.h:2489: error: expected primary-expression before ‘int’ openmx_common.h:2489: error: expected primary-expression before ‘int’ openmx_common.h:2489: error: expected primary-expression before ‘int’ openmx_common.h:2489: error: initializer expression list treated as compound expression openmx_common.h:2490: error: variable or field ‘BroadCast_ReMatrix’ declared void openmx_common.h:2490: error: ‘MPI_Comm’ was not declared in this scope openmx_common.h:2491: error: expected primary-expression before ‘double’ openmx_common.h:2491: error: expected primary-expression before ‘int’ openmx_common.h:2491: error: expected primary-expression before ‘int’ openmx_common.h:2491: error: expected primary-expression before ‘int’ openmx_common.h:2491: error: expected primary-expression before ‘int’ openmx_common.h:2491: error: expected primary-expression before ‘int’ openmx_common.h:2492: error: ‘MPI_Status’ was not declared in this scope openmx_common.h:2492: error: ‘stat_send’ was not declared in this scope openmx_common.h:2493: error: ‘MPI_Request’ was not declared in this scope openmx_common.h:2493: error: ‘request_send’ was not declared in this scope openmx_common.h:2494: error: ‘MPI_Request’ was not declared in this scope openmx_common.h:2494: error: ‘request_recv’ was not declared in this scope openmx_common.h:2494: error: initializer expression list treated as compound expression openmx_common.h:2495: error: variable or field ‘BroadCast_ComplexMatrix’ declared void openmx_common.h:2495: error: ‘MPI_Comm’ was not declared in this scope openmx_common.h:2496: error: expected primary-expression before ‘*’ token openmx_common.h:2496: error: ‘Mat’ was not declared in this scope openmx_common.h:2496: error: expected primary-expression before ‘int’ openmx_common.h:2496: error: expected primary-expression before ‘int’ openmx_common.h:2496: error: expected primary-expression before ‘int’ openmx_common.h:2496: error: expected primary-expression before ‘int’ openmx_common.h:2496: error: expected primary-expression before ‘int’ openmx_common.h:2497: error: ‘MPI_Status’ was not declared in this scope openmx_common.h:2497: error: ‘stat_send’ was not declared in this scope openmx_common.h:2498: error: ‘MPI_Request’ was not declared in this scope openmx_common.h:2498: error: ‘request_send’ was not declared in this scope openmx_common.h:2499: error: ‘MPI_Request’ was not declared in this scope openmx_common.h:2499: error: ‘request_recv’ was not declared in this scope openmx_common.h:2499: error: initializer expression list treated as compound expression openmx_common.h:2528: error: variable or field ‘Make_Comm_Worlds’ declared void openmx_common.h:2528: error: ‘MPI_Comm’ was not declared in this scope openmx_common.h:2529: error: expected primary-expression before ‘int’ openmx_common.h:2530: error: expected primary-expression before ‘int’ openmx_common.h:2531: error: expected primary-expression before ‘int’ openmx_common.h:2532: error: expected primary-expression before ‘int’ openmx_common.h:2533: error: ‘MPI_Comm’ was not declared in this scope openmx_common.h:2533: error: ‘MPI_CommWD’ was not declared in this scope openmx_common.h:2534: error: expected primary-expression before ‘int’ openmx_common.h:2535: error: expected primary-expression before ‘int’ openmx_common.h:2536: error: expected primary-expression before ‘int’ openmx_common.h:2537: error: expected primary-expression before ‘int’ openmx_common.h:2538: error: initializer expression list treated as compound expression openmx.c: In function ‘int main(int, char**)’: openmx.c:97: error: ‘MPI_Request’ was not declared in this scope openmx.c:97: error: expected `;' before ‘request’ openmx.c:98: error: ‘MPI_Status’ was not declared in this scope openmx.c:98: error: expected `;' before ‘status’ openmx.c:102: error: ‘mpi_comm_level1’ was not declared in this scope openmx.c:102: error: ‘MPI_COMM_WORLD’ was not declared in this scope openmx.c:103: error: ‘MPI_Init’ was not declared in this scope openmx.c:104: error: ‘MPI_Comm_size’ was not declared in this scope openmx.c:105: error: ‘MPI_Comm_rank’ was not declared in this scope openmx.c:116: error: ‘MPI_Finalize’ was not declared in this scope openmx.c:236: error: ‘MPI_Barrier’ was not declared in this scope openmx.c:262: error: ‘MPI_INT’ was not declared in this scope openmx.c:262: error: ‘MPI_Bcast’ was not declared in this scope openmx.c:295: error: ‘MPI_Finalize’ was not declared in this scope openmx.c:391: error: ‘MPI_Finalize’ was not declared in this scope make: *** [openmx.o] Error 1

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Re: OpenMx installation on Asus G2P laptop ( No.1 ) Date: 2008/06/25 18:24 Name: Naoto  <rei_m2@yahoo.com> I solved the previous problem installing OpenMx v.3.4 but now I got a different error message: openmx.c:79:17: error: omp.h: No such file or directory openmx.c: In function ‘int main(int, char**)’: openmx.c:173: error: ‘omp_set_num_threads’ was not declared in this scope make: *** [openmx.o] Error 1 could anyone help me? Thanks a lot best regards Naoto Re: OpenMx installation on Asus G2P laptop ( No.2 ) Date: 2008/06/26 10:31 Name: T.Ozaki Hi, Please add -Dnoomp as compile option. Regards, TO Re: OpenMx installation on Asus G2P laptop ( No.3 ) Date: 2008/06/27 18:06 Name: Naoto  <rei_m2@yahoo.com> Dear Prof. Ozaki, I solved the previous problem but I got a new error message: Poisson.c: In function ‘void FFT_Poisson(int, int, int, int, int, int, int, int, int, int, double***, double***, double***, double***)’: Poisson.c:156: error: invalid conversion from ‘void*’ to ‘double (*)[2]’ Poisson.c:157: error: invalid conversion from ‘void*’ to ‘double (*)[2]’ make: *** [Poisson.o] Error 1 Any suggestion? Thanks a lot for your help kind regards Naoto PS: these are my lines for compliling: mpicc= /usr/lib64/mpich/bin/mpiCC CC = $(mpicc) -O3 -Dnoomp -I/usr/lib64/include -I/home/naoto/include -I/usr/include -I/usr/lib64/mpich/include LIB = /usr/lib64/liblapack.a /usr/lib64/libblas.a /usr/lib64/libg2c.a -lfftw3 -static

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